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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015898422.1_cds_XP_016448523.1_43167
CDS Infomation

[gene=LOC107773632] [db_xref=GeneID:107773632] [protein=LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 1.1] [protein_id=XP_016448523.1] [location=complement(join(28420..29363,29442..29696,29826..29873,29992..30172,30262..30666,31038..31120,32033..32168))] [gbkey=CDS]
Sequence

ATGGGTTTAACGAATGAGGAGGAAGAGGAAGTGGCATGGAAAATGGGGAAGGGTTTGTTG
AACCCTAGCTGGTCGGAAAATGTAAAGGGGATCACCGGAGTAATTTTCCGGCAAGCATTG
ATTTTCCGAAAAAGCAGTTCTGCGCCGAAGCTATTGGATTCAGTTGAACCTGCTCGTTAT
ATTGTAGATCTGCCCCTGAATATAGCTTCTATTTCTACAGCAAATGGTTTAACTAACTCT
ACTTGTCGAAAGTCCTTTTCATGCGGAAATCTTACTGACCTGAGCTTTCCTTTCTCTCTT
TCCACACAATCTGACTGTGGAATAATGTCCATTTCTGGTTGTGATGCTAAACCATTTCCA
AGAATCCAACTGCTTCCTGGAGGCGATTGGTACTATGCTTTACAGAAGCCGTTTAATTAT
ACAGTTTTGCTTGCGGACGCCAAGCTTAATACCATGTTGACGCAACACAAGTGCCAGGCG
TTTAACAATAAATTCTCCCTTCCAGACTCCCCTTCTATTTCTTTCACTACGCTTTCGCTT
CACAACTTCTTCAAATGCAGTAGCAACAGTAATAATACCCCATACATTACCCAGAAAATG
AGTGCTCATTTCAATGATTATGAACTGTTCTCGCTTATTAAATTGCCAATTGACCCGAGA
TCATATGATGGTGATTTGTTCAACTTGTTAGTTCCCTATTTTCTAGTAGAATGGAAACTA
TCTGATGACTGTTACCACTGCCACTATGGTGGAGATGGAGGTCAATGCCACGCTGATAAA
ACCAACAAATTTTATTGTCACAAAGATGCAAAAACAACTAAAAGACGTGCAGTGTGGCTG
TTTCTGGCAGCAGGTTTTGGTGGAGTTGGGTTGGCGCTGATAACTTGCTTAGTTGTGTAC
TTTATCTGGTGTTATCAGAAGAGGAAATTCAGTCCATCACGCTTTCTCTCAACAAAGAAA
TTGTCAGATATATTTAAACATGATGTTGAGATAGGCAGTATATACTTTTGTGTCCCAGTC
TTCTCTTATTCAGAACTTGAAGAAGCTACAAATGATTTCAATTCCTCTAGAGTACTTGGA
GATGGAGGTTTTGGAACTGTTTACTATGGAAAACTTAAGGATGGAAGAGACGTTGCTGTA
AAGCGCCTTTACGAGCACAACTGCAAGCGAATGGAGCAGTTTGTAAATGAAATTGAGATC
CTTACTAGACTAAGGCACAACAATCTTGTCACCCTCTATGGCTGCACTTCAAGCCGAAGC
CGTGAACTACTCCTTGTCTATGAATATATTCTTAATGGAACTCTTGCTGATCATCTCCAT
GGTCAAAGAGCGAAGCAGCTATCACTCGCGTGGCCAATTCGCATGAACATTGCTATAGAA
ACTGCTGGTGCATTGGCTTACTTGCATGCTTCTGACGTAATACACTGCGATGTCAAGACT
AGTAACATACTCCTTGATCACAATTTTAGTGTTAAAGTTGCAGATTTTGGGATTTCAAGG
CTCTTCCCAAATGATGTCTCTCATATTTCAACTGCACCGCGGGGAACCCCTGGCTATATT
GATCCAAAGTATCACGAATGTTACCAGCTGACTAGTAAAAGCGATGTTTATAGCTTCGGG
GTGGTCCTTGTCGAGCTCATTTCATCAATGCCAGCTGTGGACATGAATAGGCATAGCCAA
GAGATTAATTTGGCTAACTTTGCAATAAACAAGATAGTAAAATGTGCATTTAACGAGTTG
ATCGATCCATCCCTGGGGTTCGATTCAGATACCAAGATATGGGAAATGGCGACTTCAGTG
GCAGAGCTGGCTTTTCTATGCTTGCAGACAGATAGGGATGTGAGGCCTACTATGGTTGAA
GTTCTGGATATTCTAAAGGAGATTCAGACTAGTGAACTTGACAATGAGAAGAGAGCTAAA
ATAGTAGCAGTTCCTCCTTTCCCTGAATCAGAAAATTTGTTATTGTCGAAGCAAGTCAAA
TCCCTACCTTCACCAAATTCTTTGAGTGATAAATGGTTTACTTGCTCTGATATAACTAGT
ACAACTAGTTAA

Peptide Sequence

PEP ID

XP_016448523.1
PEP Infomation

PREDICTED: LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 1.1 [Nicotiana tabacum]
Sequence

MGLTNEEEEEVAWKMGKGLLNPSWSENVKGITGVIFRQALIFRKSSSAPKLLDSVEPARY
IVDLPLNIASISTANGLTNSTCRKSFSCGNLTDLSFPFSLSTQSDCGIMSISGCDAKPFP
RIQLLPGGDWYYALQKPFNYTVLLADAKLNTMLTQHKCQAFNNKFSLPDSPSISFTTLSL
HNFFKCSSNSNNTPYITQKMSAHFNDYELFSLIKLPIDPRSYDGDLFNLLVPYFLVEWKL
SDDCYHCHYGGDGGQCHADKTNKFYCHKDAKTTKRRAVWLFLAAGFGGVGLALITCLVVY
FIWCYQKRKFSPSRFLSTKKLSDIFKHDVEIGSIYFCVPVFSYSELEEATNDFNSSRVLG
DGGFGTVYYGKLKDGRDVAVKRLYEHNCKRMEQFVNEIEILTRLRHNNLVTLYGCTSSRS
RELLLVYEYILNGTLADHLHGQRAKQLSLAWPIRMNIAIETAGALAYLHASDVIHCDVKT
SNILLDHNFSVKVADFGISRLFPNDVSHISTAPRGTPGYIDPKYHECYQLTSKSDVYSFG
VVLVELISSMPAVDMNRHSQEINLANFAINKIVKCAFNELIDPSLGFDSDTKIWEMATSV
AELAFLCLQTDRDVRPTMVEVLDILKEIQTSELDNEKRAKIVAVPPFPESENLLLSKQVK
SLPSPNSLSDKWFTCSDITSTTS

Transcript Sequence

Gene sequence data has not been registered.